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CN09_08765 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_08765" - Membrane protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_08765Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)    
Predicted Functional Partners:
CN09_08760
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)
 
          0.733
CN09_08010
Amino acid ABC transporter substrate-bindnig protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (341 aa)
              0.725
CN09_14785
HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
              0.712
CN09_29295
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
              0.706
CN09_02850
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
 
          0.621
hisB
Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (202 aa)
              0.495
hisI
Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP (149 aa)
              0.424
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (432 aa)
              0.422
CN09_15160
2-deoxycytidine 5-triphosphate deaminase; Catalyzes the deamination of dCTP to form dUTP; Derived by automated computational analysis using gene prediction method- Protein Homology (363 aa)
              0.412
CN09_12305
Enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family (260 aa)
              0.400
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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