CN09_09040 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_09040

Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology (89 aa)

Predicted Functional Partners:

CN09_10285

0.704

CN09_10005

0.701

CN09_11870

0.619

CN09_23710

0.615

CN09_02510

0.611

CN09_13590

0.600

CN09_08380

0.566

CN09_21310

0.558

CN09_09035

0.555

CN09_08500

0.548

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_02510	CN09_08500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	0.623
CN09_02510	CN09_09040	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.611
CN09_02510	CN09_10005	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_02510	CN09_10285	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.529
CN09_02510	CN09_11870	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.511
CN09_02510	CN09_13590	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.451
CN09_02510	CN09_21310	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.400
CN09_08380	CN09_08500	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	0.571
CN09_08380	CN09_09040	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.566
CN09_08380	CN09_10005	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.496
CN09_08380	CN09_11870	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.461
CN09_08380	CN09_23710	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Succinoglycan biosynthesis protein exoh; Derived by automated computational analysis using gene prediction method: Protein Homology	0.495
CN09_08500	CN09_02510	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.623
CN09_08500	CN09_08380	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.571
CN09_08500	CN09_09040	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.548
CN09_08500	CN09_10005	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.763
CN09_08500	CN09_10285	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.770
CN09_08500	CN09_11870	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.779
CN09_08500	CN09_13590	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.684
CN09_08500	CN09_21310	Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.664