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CN09_09120 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_09120" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_09120Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (478 aa)    
Predicted Functional Partners:
CN09_08270
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (572 aa)
              0.999
CN09_09115
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (247 aa)
 
          0.984
CN09_09285
Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology (497 aa)
 
          0.959
CN09_04675
Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology (513 aa)
 
          0.956
CN09_09125
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)
              0.952
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
              0.945
CN09_09235
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (352 aa)
 
   
  0.929
CN09_09245
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
 
        0.928
CN09_09260
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
 
        0.917
CN09_06175
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (842 aa)
         
  0.843
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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