CN09_09120 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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white nodes:
second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_09120

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (478 aa)

Predicted Functional Partners:

CN09_08270

0.999

CN09_09115

0.984

CN09_09285

0.959

CN09_04675

0.956

CN09_09125

0.952

CN09_15290

0.945

CN09_09235

0.929

CN09_09245

0.928

CN09_09260

0.917

CN09_06175

0.843

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_04675	CN09_06175	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.476
CN09_04675	CN09_09120	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.956
CN09_04675	CN09_09235	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.988
CN09_04675	CN09_09245	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.989
CN09_04675	CN09_09260	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.986
CN09_04675	CN09_09285	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.862
CN09_04675	CN09_15290	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_06175	CN09_04675	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.476
CN09_06175	CN09_08270	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.982
CN09_06175	CN09_09120	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.843
CN09_06175	CN09_15290	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_08270	CN09_06175	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.982
CN09_08270	CN09_09120	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_08270	CN09_15290	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_09115	CN09_09120	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.984
CN09_09115	CN09_09125	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.930
CN09_09115	CN09_09235	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.876
CN09_09115	CN09_09245	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.861
CN09_09115	CN09_09260	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.687
CN09_09120	CN09_04675	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Terminase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.956