Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_07710 | aat | CN09_07710 | CN09_09685 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | 0.999 |
| CN09_07710 | bpt | CN09_07710 | CN09_10420 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme | Arginyl-trna-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | 0.999 |
| CN09_07710 | infA | CN09_07710 | CN09_20035 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex | 0.911 |
| CN09_07960 | aat | CN09_07960 | CN09_09685 | Clp protease clps; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | 0.916 |
| CN09_07960 | bpt | CN09_07960 | CN09_10420 | Clp protease clps; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation | Arginyl-trna-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate | 0.641 |
| CN09_07960 | clpA | CN09_07960 | CN09_07955 | Clp protease clps; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation | Clp protease clpx; Belongs to the ClpA/ClpB family | 0.999 |
| CN09_07960 | infA | CN09_07960 | CN09_20035 | Clp protease clps; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation | Translation initiation factor if-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex | 0.553 |
| CN09_09665 | CN09_09675 | CN09_09665 | CN09_09675 | DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | 0.851 |
| CN09_09665 | aat | CN09_09665 | CN09_09685 | DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | 0.878 |
| CN09_09665 | accC | CN09_09665 | CN09_09680 | DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | 0.851 |
| CN09_09665 | aroQ | CN09_09665 | CN09_09670 | DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate | 0.660 |
| CN09_09675 | CN09_09665 | CN09_09675 | CN09_09665 | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.851 |
| CN09_09675 | aat | CN09_09675 | CN09_09685 | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | 0.998 |
| CN09_09675 | accC | CN09_09675 | CN09_09680 | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | 0.999 |
| CN09_09675 | aroQ | CN09_09675 | CN09_09670 | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate | 0.864 |
| aat | CN09_07710 | CN09_09685 | CN09_07710 | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme | 0.999 |
| aat | CN09_07960 | CN09_09685 | CN09_07960 | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Clp protease clps; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation | 0.916 |
| aat | CN09_09665 | CN09_09685 | CN09_09665 | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.878 |
| aat | CN09_09675 | CN09_09685 | CN09_09675 | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | 0.998 |
| aat | accC | CN09_09685 | CN09_09680 | Leucyl-trna--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine | Acetyl-coa carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA | 0.984 |
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