CN09_10325 protein (Agrobacterium rhizogenes)

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Score

CN09_10325

Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)

Predicted Functional Partners:

pheT

0.999

CN09_10375

0.999

rpmF

0.968

CN09_10330

0.965

polA

0.945

CN09_10335

0.932

rpsP

0.920

plsX

0.920

rpmB

0.919

rimM

0.918

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_10325	CN09_10330	CN09_10325	CN09_10330	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ubiquinol-cytochrome C chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	0.965
CN09_10325	CN09_10335	CN09_10325	CN09_10335	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.932
CN09_10325	CN09_10375	CN09_10325	CN09_10375	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.999
CN09_10325	pheT	CN09_10325	CN09_13825	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.999
CN09_10325	plsX	CN09_10325	CN09_10320	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA	0.920
CN09_10325	polA	CN09_10325	CN09_13050	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.945
CN09_10325	rimM	CN09_10325	CN09_28325	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family	0.918
CN09_10325	rpmB	CN09_10325	CN09_27585	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL28 family	0.919
CN09_10325	rpmF	CN09_10325	CN09_29440	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL32 family	0.968
CN09_10325	rpsP	CN09_10325	CN09_28320	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bS16 family	0.920
CN09_10330	CN09_10325	CN09_10330	CN09_10325	Ubiquinol-cytochrome C chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.965
CN09_10330	CN09_10335	CN09_10330	CN09_10335	Ubiquinol-cytochrome C chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.870
CN09_10330	plsX	CN09_10330	CN09_10320	Ubiquinol-cytochrome C chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA	0.878
CN09_10330	rpmF	CN09_10330	CN09_29440	Ubiquinol-cytochrome C chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL32 family	0.744
CN09_10335	CN09_10325	CN09_10335	CN09_10325	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.932
CN09_10335	CN09_10330	CN09_10335	CN09_10330	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Ubiquinol-cytochrome C chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology	0.870
CN09_10335	plsX	CN09_10335	CN09_10320	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA	0.811
CN09_10335	rpmF	CN09_10335	CN09_29440	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL32 family	0.732
CN09_10375	CN09_10325	CN09_10375	CN09_10325	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_10375	pheT	CN09_10375	CN09_13825	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.544

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