STRINGSTRING
CN09_10330 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_10330" - Ubiquinol-cytochrome C chaperone in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_10330Ubiquinol-cytochrome C chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)    
Predicted Functional Partners:
CN09_10325
Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)
 
          0.965
plsX
Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA (348 aa)
              0.878
fabH
3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and/or straight-chain of fatty acids; Belongs to the FabH family (323 aa)
              0.870
CN09_10335
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
 
          0.870
himA
Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (112 aa)
              0.828
CN09_10305
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)
              0.794
rpmF
50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL32 family (61 aa)
              0.744
CN09_28515
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
   
          0.625
CN09_16885
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (121 aa)
   
          0.590
CN09_17650
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (121 aa)
   
          0.579
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (9%) [HD]