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CN09_10400 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_10400" - MarR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Databases
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[Homology]
Score
CN09_10400MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (171 aa)    
Predicted Functional Partners:
CN09_10410
Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ALAD family (337 aa)
         
  0.971
CN09_10390
Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
 
     
  0.926
CN09_10405
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (145 aa)
         
  0.909
CN09_15370
3-hydroxyisobutyryl-CoA hydrolase; Catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (352 aa)
         
  0.746
CN09_06965
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (140 aa)
     
 
  0.722
CN09_15375
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the 3-hydroxyisobutyrate dehydrogenase family (293 aa)
              0.722
CN09_04380
Aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
         
  0.715
CN09_07055
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
   
          0.700
CN09_28075
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (532 aa)
   
          0.639
CN09_07130
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (384 aa)
 
          0.617
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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