CN09_10470 protein (Agrobacterium rhizogenes)

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Predicted Interactions

gene neighborhood

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Score

CN09_10470

Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (463 aa)

Predicted Functional Partners:

rnd

0.977

CN09_14085

0.868

CN09_28900

0.863

CN09_14080

0.854

CN09_14095

0.843

CN09_14090

0.821

CN09_28895

0.810

hemE

0.777

CN09_01960

0.740

CN09_06870

0.711

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01960	CN09_10470	CN09_01960	CN09_10470	Cu resistance protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.740
CN09_06870	CN09_10470	CN09_06870	CN09_10470	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.711
CN09_10470	CN09_01960	CN09_10470	CN09_01960	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Cu resistance protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.740
CN09_10470	CN09_06870	CN09_10470	CN09_06870	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.711
CN09_10470	CN09_14080	CN09_10470	CN09_14080	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.854
CN09_10470	CN09_14085	CN09_10470	CN09_14085	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.868
CN09_10470	CN09_14090	CN09_10470	CN09_14090	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.821
CN09_10470	CN09_14095	CN09_10470	CN09_14095	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.843
CN09_10470	CN09_28895	CN09_10470	CN09_28895	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Copper ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.810
CN09_10470	CN09_28900	CN09_10470	CN09_28900	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.863
CN09_10470	hemE	CN09_10470	CN09_17710	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III	0.777
CN09_10470	rnd	CN09_10470	CN09_10475	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides; Belongs to the RNase D family	0.977
CN09_14080	CN09_10470	CN09_14080	CN09_10470	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.854
CN09_14080	CN09_14085	CN09_14080	CN09_14085	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.990
CN09_14080	CN09_14090	CN09_14080	CN09_14090	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.989
CN09_14080	CN09_14095	CN09_14080	CN09_14095	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.980
CN09_14085	CN09_10470	CN09_14085	CN09_10470	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.868
CN09_14085	CN09_14080	CN09_14085	CN09_14080	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.990
CN09_14085	CN09_14090	CN09_14085	CN09_14090	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.991
CN09_14085	CN09_14095	CN09_14085	CN09_14095	Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.982

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