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CN09_10470 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_10470" - Copper oxidase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
CN09_10470Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (463 aa)    
Predicted Functional Partners:
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides; Belongs to the RNase D family (381 aa)
         
  0.977
CN09_14085
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (373 aa)
 
          0.868
CN09_28900
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (128 aa)
 
     
  0.863
CN09_14080
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
 
          0.854
CN09_14095
Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
          0.843
CN09_14090
Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (519 aa)
 
          0.821
CN09_28895
Copper ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (832 aa)
 
 
  0.810
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (344 aa)
         
  0.777
CN09_01960
Cu resistance protein; Derived by automated computational analysis using gene prediction method- Protein Homology (122 aa)
         
  0.740
CN09_06870
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (230 aa)
   
 
  0.711
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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