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rlmJ protein (Agrobacterium rhizogenes) - STRING interaction network
"rlmJ" - Ribosomal RNA large subunit methyltransferase J in Agrobacterium rhizogenes
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rlmJRibosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (283 aa)    
Predicted Functional Partners:
CN09_10540
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
              0.926
CN09_02265
Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (869 aa)
              0.858
CN09_06305
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (559 aa)
              0.836
tsaD
tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family (365 aa)
   
        0.757
CN09_10530
Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (718 aa)
              0.750
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
        0.744
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
              0.744
CN09_06780
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (451 aa)
              0.744
CN09_28080
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (161 aa)
              0.724
CN09_15390
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (852 aa)
         
  0.706
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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