CN09_10610 protein (Agrobacterium rhizogenes)

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Score

CN09_10610

Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (296 aa)

Predicted Functional Partners:

CN09_24355

0.926

CN09_10605

0.613

CN09_06630

0.607

CN09_10615

0.604

CN09_10600

0.569

polA

0.516

CN09_17375

0.506

CN09_15290

0.470

CN09_17380

0.445

CN09_28835

0.434

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_06630	CN09_10610	CN09_06630	CN09_10610	Glutaredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.607
CN09_10600	CN09_10605	CN09_10600	CN09_10605	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology	0.699
CN09_10600	CN09_10610	CN09_10600	CN09_10610	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.569
CN09_10600	CN09_15290	CN09_10600	CN09_15290	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.600
CN09_10600	polA	CN09_10600	CN09_13050	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.498
CN09_10605	CN09_10600	CN09_10605	CN09_10600	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.699
CN09_10605	CN09_10610	CN09_10605	CN09_10610	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.613
CN09_10605	CN09_10615	CN09_10605	CN09_10615	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.412
CN09_10605	CN09_15290	CN09_10605	CN09_15290	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.502
CN09_10610	CN09_06630	CN09_10610	CN09_06630	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutaredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily	0.607
CN09_10610	CN09_10600	CN09_10610	CN09_10600	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.569
CN09_10610	CN09_10605	CN09_10610	CN09_10605	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology	0.613
CN09_10610	CN09_10615	CN09_10610	CN09_10615	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.604
CN09_10610	CN09_15290	CN09_10610	CN09_15290	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.470
CN09_10610	CN09_17375	CN09_10610	CN09_17375	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.506
CN09_10610	CN09_17380	CN09_10610	CN09_17380	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Proline dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.445
CN09_10610	CN09_24355	CN09_10610	CN09_24355	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.926
CN09_10610	CN09_28835	CN09_10610	CN09_28835	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.434
CN09_10610	polA	CN09_10610	CN09_13050	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.516
CN09_10615	CN09_10605	CN09_10615	CN09_10605	Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology	0.412

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