Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CN09_07265 | CN09_07270 | Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology | Dsba oxidoreductase; Belongs to the major facilitator superfamily | 0.978 |
| CN09_07265 | CN09_10775 | Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.515 |
| CN09_07265 | CN09_10780 | Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.456 |
| CN09_07270 | CN09_07265 | Dsba oxidoreductase; Belongs to the major facilitator superfamily | Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.978 |
| CN09_07270 | CN09_08740 | Dsba oxidoreductase; Belongs to the major facilitator superfamily | Secretion protein hlyd; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.459 |
| CN09_07270 | CN09_10770 | Dsba oxidoreductase; Belongs to the major facilitator superfamily | Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.727 |
| CN09_07270 | CN09_10780 | Dsba oxidoreductase; Belongs to the major facilitator superfamily | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.447 |
| CN09_08740 | CN09_07270 | Secretion protein hlyd; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | Dsba oxidoreductase; Belongs to the major facilitator superfamily | 0.459 |
| CN09_08740 | CN09_08745 | Secretion protein hlyd; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.983 |
| CN09_08740 | CN09_08750 | Secretion protein hlyd; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.996 |
| CN09_08740 | CN09_10780 | Secretion protein hlyd; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.724 |
| CN09_08745 | CN09_08740 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Secretion protein hlyd; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.983 |
| CN09_08745 | CN09_08750 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.990 |
| CN09_08745 | CN09_10780 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.689 |
| CN09_08750 | CN09_08740 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Secretion protein hlyd; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family | 0.996 |
| CN09_08750 | CN09_08745 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.990 |
| CN09_08750 | CN09_10770 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.462 |
| CN09_08750 | CN09_10780 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.696 |
| CN09_10770 | CN09_07270 | Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology | Dsba oxidoreductase; Belongs to the major facilitator superfamily | 0.727 |
| CN09_10770 | CN09_08750 | Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.462 |
page 1 of 2
