CN09_10850 protein (Agrobacterium rhizogenes)

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protein homology

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Score

CN09_10850

Permease; Derived by automated computational analysis using gene prediction method- Protein Homology (303 aa)

Predicted Functional Partners:

CN09_10845

0.874

cysS

0.824

nnrD

0.803

tmk

0.779

CN09_07310

0.753

asd

0.744

CN09_07330

0.744

CN09_07325

0.744

CN09_07300

0.744

CN09_29445

0.722

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_07300	CN09_07310	CN09_07300	CN09_07310	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.983
CN09_07300	CN09_07325	CN09_07300	CN09_07325	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07300	CN09_07330	CN09_07300	CN09_07330	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07300	CN09_10850	CN09_07300	CN09_10850	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family	Permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07300	tmk	CN09_07300	CN09_07305	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	0.978
CN09_07310	CN09_07300	CN09_07310	CN09_07300	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family	0.983
CN09_07310	CN09_07325	CN09_07310	CN09_07325	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.797
CN09_07310	CN09_07330	CN09_07310	CN09_07330	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	0.794
CN09_07310	CN09_10850	CN09_07310	CN09_10850	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	Permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.753
CN09_07310	cysS	CN09_07310	CN09_10820	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	Cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family	0.720
CN09_07310	tmk	CN09_07310	CN09_07305	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	0.999
CN09_07325	CN09_07300	CN09_07325	CN09_07300	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family	0.744
CN09_07325	CN09_07310	CN09_07325	CN09_07310	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.797
CN09_07325	CN09_07330	CN09_07325	CN09_07330	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	0.998
CN09_07325	CN09_10850	CN09_07325	CN09_10850	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744
CN09_07325	tmk	CN09_07325	CN09_07305	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis	0.785
CN09_07330	CN09_07300	CN09_07330	CN09_07300	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family	0.744
CN09_07330	CN09_07310	CN09_07330	CN09_07310	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the delta’ subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology	0.794
CN09_07330	CN09_07325	CN09_07330	CN09_07325	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology	0.998
CN09_07330	CN09_10850	CN09_07330	CN09_10850	PhnP; Derived by automated computational analysis using gene prediction method- Protein Homology	Permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.744

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