CN09_10865 protein (Agrobacterium rhizogenes)

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Score

CN09_10865

Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology (668 aa)

Predicted Functional Partners:

topA

0.999

CN09_15290

0.976

CN09_02135

0.930

CN09_08270

0.915

CN09_06175

0.908

CN09_10855

0.877

CN09_10870

0.851

psd

0.792

CN09_10885

0.790

CN09_17845

0.789

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_02135	CN09_10865	CN09_02135	CN09_10865	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	0.930
CN09_02135	CN09_17845	CN09_02135	CN09_17845	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Dps family	0.659
CN09_06175	CN09_08270	CN09_06175	CN09_08270	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.982
CN09_06175	CN09_10865	CN09_06175	CN09_10865	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	0.908
CN09_06175	CN09_15290	CN09_06175	CN09_15290	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_06175	topA	CN09_06175	CN09_09825	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...]	0.556
CN09_08270	CN09_06175	CN09_08270	CN09_06175	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.982
CN09_08270	CN09_10865	CN09_08270	CN09_10865	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	0.915
CN09_08270	CN09_15290	CN09_08270	CN09_15290	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_10855	CN09_10865	CN09_10855	CN09_10865	Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the LOG family	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	0.877
CN09_10855	CN09_10870	CN09_10855	CN09_10870	Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the LOG family	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.821
CN09_10855	CN09_10885	CN09_10855	CN09_10885	Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the LOG family	CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family	0.781
CN09_10855	CN09_15290	CN09_10855	CN09_15290	Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the LOG family	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.723
CN09_10855	psd	CN09_10855	CN09_10880	Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the LOG family	Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer); Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily	0.782
CN09_10865	CN09_02135	CN09_10865	CN09_02135	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.930
CN09_10865	CN09_06175	CN09_10865	CN09_06175	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.908
CN09_10865	CN09_08270	CN09_10865	CN09_08270	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.915
CN09_10865	CN09_10855	CN09_10865	CN09_10855	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the LOG family	0.877
CN09_10865	CN09_10870	CN09_10865	CN09_10870	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.851
CN09_10865	CN09_10885	CN09_10865	CN09_10885	Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology	CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family	0.790

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