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CN09_10930 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_10930" - Hydrolase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_10930Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (205 aa)    
Predicted Functional Partners:
CN09_12395
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
              0.999
CN09_10925
Aminomethyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GcvT family (279 aa)
              0.955
CN09_10935
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (177 aa)
              0.940
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
              0.909
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
              0.902
CN09_03210
Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
   
   
  0.837
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (362 aa)
   
   
  0.835
CN09_15160
2-deoxycytidine 5-triphosphate deaminase; Catalyzes the deamination of dCTP to form dUTP; Derived by automated computational analysis using gene prediction method- Protein Homology (363 aa)
   
          0.780
CN09_26340
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
          0.776
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (466 aa)
         
  0.774
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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