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CN09_10945 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_10945" - Superoxide dismutase [Cu-Zn] in Agrobacterium rhizogenes
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_10945Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family (168 aa)    
Predicted Functional Partners:
CN09_31570
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide (697 aa)
 
 
  0.893
CN09_12115
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (200 aa)
   
 
  0.857
CN09_06270
Glutathione reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (461 aa)
     
 
  0.802
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
         
  0.783
CN09_00335
With AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
     
 
  0.771
CN09_14315
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (264 aa)
   
   
  0.769
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (732 aa)
           
  0.769
CN09_16705
Hemolysin; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
         
  0.728
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (934 aa)
              0.725
CN09_32750
Glutathione peroxidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutathione peroxidase family (183 aa)
   
 
  0.679
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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