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CN09_11435 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_11435" - DNA helicase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_11435DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (589 aa)    
Predicted Functional Partners:
CN09_18560
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1702 aa)
   
 
  0.999
CN09_33540
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
              0.893
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
 
  0.874
CN09_11460
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
 
          0.835
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
   
 
  0.769
CN09_17035
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family (376 aa)
         
  0.726
CN09_11375
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (711 aa)
 
          0.705
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (606 aa)
   
   
  0.688
CN09_00705
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (988 aa)
   
        0.687
CN09_09375
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family (324 aa)
         
  0.672
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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