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CN09_11570 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_11570" - Myo-inositol 2-dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_11570Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)    
Predicted Functional Partners:
CN09_11580
5-dehydro-2-deoxygluconokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (644 aa)
     
  0.886
CN09_11590
MocC; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)
   
  0.872
CN09_11595
5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
 
     
  0.863
CN09_11575
RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
 
   
  0.843
CN09_11585
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the TPP enzyme family (616 aa)
 
     
  0.834
CN09_34455
MocC; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
  0.834
CN09_34460
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the TPP enzyme family (623 aa)
 
     
  0.759
CN09_01360
AP endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
   
  0.742
CN09_34490
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
   
  0.645
CN09_11565
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (405 aa)
              0.545
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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