CN09_11600 protein (Agrobacterium rhizogenes)

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[Homology]

Score

CN09_11600

Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)

Predicted Functional Partners:

CN09_11605

0.939

CN09_16300

0.677

CN09_04750

0.562

pheT

0.560

polA

0.530

CN09_20915

0.517

macB

0.509

CN09_02665

0.452

CN09_11610

0.437

CN09_20925

0.417

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_02665	CN09_11600	CN09_02665	CN09_11600	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	0.452
CN09_04750	CN09_11600	CN09_04750	CN09_11600	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	0.562
CN09_04750	CN09_16300	CN09_04750	CN09_16300	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.904
CN09_04750	polA	CN09_04750	CN09_13050	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.555
CN09_11600	CN09_02665	CN09_11600	CN09_02665	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.452
CN09_11600	CN09_04750	CN09_11600	CN09_04750	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.562
CN09_11600	CN09_11605	CN09_11600	CN09_11605	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.939
CN09_11600	CN09_11610	CN09_11600	CN09_11610	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Protein required for attachment to host cells; Derived by automated computational analysis using gene prediction method- Protein Homology	0.437
CN09_11600	CN09_16300	CN09_11600	CN09_16300	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.677
CN09_11600	CN09_20915	CN09_11600	CN09_20915	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Sugar kinase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.517
CN09_11600	CN09_20925	CN09_11600	CN09_20925	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.417
CN09_11600	macB	CN09_11600	CN09_25550	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides	0.509
CN09_11600	pheT	CN09_11600	CN09_13825	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily	0.560
CN09_11600	polA	CN09_11600	CN09_13050	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity	0.530
CN09_11605	CN09_11600	CN09_11605	CN09_11600	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	0.939
CN09_11605	CN09_11610	CN09_11605	CN09_11610	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Protein required for attachment to host cells; Derived by automated computational analysis using gene prediction method- Protein Homology	0.525
CN09_11610	CN09_11600	CN09_11610	CN09_11600	Protein required for attachment to host cells; Derived by automated computational analysis using gene prediction method- Protein Homology	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	0.437
CN09_11610	CN09_11605	CN09_11610	CN09_11605	Protein required for attachment to host cells; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.525
CN09_16300	CN09_04750	CN09_16300	CN09_04750	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.904
CN09_16300	CN09_11600	CN09_16300	CN09_11600	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method- Protein Homology	0.677

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