CN09_11680 protein (Agrobacterium rhizogenes)

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

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[Homology]

Score

CN09_11680

Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology (319 aa)

Predicted Functional Partners:

CN09_11685

0.929

CN09_11690

0.905

CN09_23625

0.809

CN09_30430

0.801

CN09_18865

0.757

CN09_16030

0.742

ribB

0.725

CN09_06240

0.706

CN09_05610

0.647

CN09_07255

0.637

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_05610	CN09_07255	CN09_05610	CN09_07255	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.493
CN09_05610	CN09_11680	CN09_05610	CN09_11680	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.647
CN09_05610	CN09_11690	CN09_05610	CN09_11690	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.432
CN09_05610	CN09_16030	CN09_05610	CN09_16030	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.607
CN09_05610	CN09_18865	CN09_05610	CN09_18865	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.560
CN09_05610	CN09_30430	CN09_05610	CN09_30430	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.540
CN09_06240	CN09_11680	CN09_06240	CN09_11680	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.706
CN09_07255	CN09_05610	CN09_07255	CN09_05610	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology	0.493
CN09_07255	CN09_11680	CN09_07255	CN09_11680	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.637
CN09_07255	CN09_11690	CN09_07255	CN09_11690	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.622
CN09_07255	CN09_16030	CN09_07255	CN09_16030	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.676
CN09_07255	CN09_18865	CN09_07255	CN09_18865	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.770
CN09_07255	CN09_30430	CN09_07255	CN09_30430	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.564
CN09_11680	CN09_05610	CN09_11680	CN09_05610	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology	0.647
CN09_11680	CN09_06240	CN09_11680	CN09_06240	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family	0.706
CN09_11680	CN09_07255	CN09_11680	CN09_07255	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.637
CN09_11680	CN09_11685	CN09_11680	CN09_11685	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Family 2 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.929
CN09_11680	CN09_11690	CN09_11680	CN09_11690	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.905
CN09_11680	CN09_16030	CN09_11680	CN09_16030	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.742
CN09_11680	CN09_18865	CN09_11680	CN09_18865	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.757

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