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CN09_11825 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_11825" - PhoB family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_11825PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)    
Predicted Functional Partners:
CN09_11820
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (471 aa)
 
  0.995
glnE
Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory regi [...] (986 aa)
         
  0.867
CN09_11840
Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method- Protein Homology (663 aa)
       
  0.822
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (149 aa)
       
  0.821
CN09_11835
Cytochrome c-type biogenesis protein; Possible subunit of a heme lyase (151 aa)
              0.816
CN09_11850
Cytochrome C biogenesis protein CycH; Derived by automated computational analysis using gene prediction method- Protein Homology (382 aa)
         
  0.811
CN09_28590
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
 
 
  0.758
CN09_14780
Calcium-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
              0.726
CN09_22855
Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (190 aa)
         
  0.696
CN09_10470
Copper oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (463 aa)
         
  0.693
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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