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ccmE protein (Agrobacterium rhizogenes) - STRING interaction network
"ccmE" - Cytochrome c-type biogenesis protein CcmE in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ccmECytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (149 aa)    
Predicted Functional Partners:
CN09_11840
Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method- Protein Homology (663 aa)
 
  0.999
CN09_11835
Cytochrome c-type biogenesis protein; Possible subunit of a heme lyase (151 aa)
 
 
  0.998
CN09_11850
Cytochrome C biogenesis protein CycH; Derived by automated computational analysis using gene prediction method- Protein Homology (382 aa)
 
 
  0.997
ccmC
Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (253 aa)
 
 
  0.994
CN09_28245
Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (219 aa)
 
 
  0.991
CN09_28260
Thiol-disulfide interchange protein CycY; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
 
   
  0.982
ccmA
Cytochrome c biogenesis ATP-binding export protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family (215 aa)
 
 
  0.969
CN09_31930
Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method- Protein Homology (1172 aa)
              0.957
CN09_12335
Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method- Protein Homology (1157 aa)
              0.957
ctaA
Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily (367 aa)
 
     
  0.866
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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