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CN09_11935 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_11935" - Cysteine desufuration protein SufE in Agrobacterium rhizogenes
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
CN09_11935Cysteine desufuration protein SufE; Derived by automated computational analysis using gene prediction method- Protein Homology (140 aa)    
Predicted Functional Partners:
CN09_06850
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family (413 aa)
 
  0.990
CN09_06830
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method- Protein Homology (489 aa)
 
 
  0.983
sufC
Cysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
 
 
  0.981
CN09_06845
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (424 aa)
 
 
  0.978
pleD
Response regulator PleD; Involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; Derived by automated computational analysis using gene prediction method- Protein Homology (457 aa)
              0.875
CN09_11930
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (153 aa)
              0.822
CN09_06855
FeS assembly SUF system protein; Derived by automated computational analysis using gene prediction method- Protein Homology (126 aa)
 
          0.805
CN09_06860
FeS assembly scaffold SufA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the HesB/IscA family (129 aa)
   
   
  0.780
hslV
ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery (175 aa)
              0.744
hslU
ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis (436 aa)
              0.744
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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