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CN09_12045 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_12045" - UPF0061 protein CN09_12045 in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
CN09_12045UPF0061 protein CN09_12045; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0061 (SELO) family (493 aa)    
Predicted Functional Partners:
CN09_27795
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (518 aa)
   
        0.761
CN09_27790
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (959 aa)
              0.744
CN09_11050
Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
        0.728
CN09_23475
Lipase; Derived by automated computational analysis using gene prediction method- Protein Homology (317 aa)
              0.714
CN09_14585
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method- Protein Homology (761 aa)
              0.710
CN09_06325
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method- Protein Homology (770 aa)
              0.710
CN09_32255
NADH oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
   
        0.701
msrB
Peptide methionine sulfoxide reductase MsrB; This stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; Derived by automated computational analysis using gene prediction method- Protein Homology (149 aa)
         
  0.694
CN09_28270
Probable intracellular septation protein A; Involved in cell division; probably involved in intracellular septation (224 aa)
              0.652
CN09_05660
Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method- Protein Homology (866 aa)
              0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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