STRINGSTRING
CN09_12075 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_12075" - 3-demethylubiquinone-9 3-methyltransferase in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_120753-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)    
Predicted Functional Partners:
CN09_12070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (208 aa)
              0.599
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
 
 
 
  0.557
CN09_04270
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (411 aa)
 
     
  0.523
CN09_06315
Ankyrin; Derived by automated computational analysis using gene prediction method- Protein Homology (591 aa)
 
 
 
  0.505
CN09_04730
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (502 aa)
 
     
  0.431
CN09_05180
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (465 aa)
 
     
  0.420
CN09_04725
Polysaccharide biosynthesis protein GumK; Derived by automated computational analysis using gene prediction method- Protein Homology (403 aa)
 
 
 
  0.420
CN09_04795
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (228 aa)
 
 
 
  0.418
CN09_11755
Electron transfer flavoprotein-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
     
 
  0.412
CN09_27360
3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (264 aa)
 
 
 
0.409
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (8%) [HD]