Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_03635 | CN09_12120 | CN09_03635 | CN09_12120 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.969 |
| CN09_03635 | CN09_33580 | CN09_03635 | CN09_33580 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.988 |
| CN09_03635 | fusA | CN09_03635 | CN09_08910 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | Elongation factor g; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome | 0.990 |
| CN09_03635 | hrpB | CN09_03635 | CN09_17415 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.992 |
| CN09_03635 | rpoA | CN09_03635 | CN09_08775 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | Dna-directed rna polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.988 |
| CN09_03635 | rpoB | CN09_03635 | CN09_08935 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | Dna-directed rna polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.989 |
| CN09_03635 | rpoC | CN09_03635 | CN09_08930 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | Dna-directed rna polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.988 |
| CN09_03635 | rpoZ | CN09_03635 | CN09_11020 | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | Dna-directed rna polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits | 0.988 |
| CN09_06775 | CN09_12120 | CN09_06775 | CN09_12120 | Rna helicase; Belongs to the DEAD box helicase family | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.973 |
| CN09_06775 | CN09_33580 | CN09_06775 | CN09_33580 | Rna helicase; Belongs to the DEAD box helicase family | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.988 |
| CN09_06775 | fusA | CN09_06775 | CN09_08910 | Rna helicase; Belongs to the DEAD box helicase family | Elongation factor g; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome | 0.990 |
| CN09_06775 | hrpB | CN09_06775 | CN09_17415 | Rna helicase; Belongs to the DEAD box helicase family | ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.991 |
| CN09_06775 | rpoA | CN09_06775 | CN09_08775 | Rna helicase; Belongs to the DEAD box helicase family | Dna-directed rna polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.988 |
| CN09_06775 | rpoB | CN09_06775 | CN09_08935 | Rna helicase; Belongs to the DEAD box helicase family | Dna-directed rna polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.989 |
| CN09_06775 | rpoC | CN09_06775 | CN09_08930 | Rna helicase; Belongs to the DEAD box helicase family | Dna-directed rna polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | 0.988 |
| CN09_06775 | rpoZ | CN09_06775 | CN09_11020 | Rna helicase; Belongs to the DEAD box helicase family | Dna-directed rna polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits | 0.988 |
| CN09_12120 | CN09_03635 | CN09_12120 | CN09_03635 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology | RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.969 |
| CN09_12120 | CN09_06775 | CN09_12120 | CN09_06775 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Rna helicase; Belongs to the DEAD box helicase family | 0.973 |
| CN09_12120 | CN09_15845 | CN09_12120 | CN09_15845 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Dead/deah box helicase; Belongs to the DEAD box helicase family | 0.973 |
| CN09_12120 | CN09_33580 | CN09_12120 | CN09_33580 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.976 |
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