CN09_12120 protein (Agrobacterium rhizogenes)

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Score

CN09_12120

Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology (68 aa)

Predicted Functional Partners:

topA

0.608

CN09_26060

0.572

CN09_08070

0.470

CN09_12125

0.469

polA

0.424

CN09_17085

0.405

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_08070	CN09_12120	CN09_08070	CN09_12120	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.470
CN09_08070	CN09_17085	CN09_08070	CN09_17085	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family	0.405
CN09_08070	polA	CN09_08070	CN09_13050	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.424
CN09_08070	topA	CN09_08070	CN09_09825	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...]	0.608
CN09_12120	CN09_08070	CN09_12120	CN09_08070	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.470
CN09_12120	CN09_12125	CN09_12120	CN09_12125	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.469
CN09_12120	CN09_17085	CN09_12120	CN09_17085	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family	0.405
CN09_12120	CN09_26060	CN09_12120	CN09_26060	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.572
CN09_12120	polA	CN09_12120	CN09_13050	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.424
CN09_12120	topA	CN09_12120	CN09_09825	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...]	0.608
CN09_12125	CN09_12120	CN09_12125	CN09_12120	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.469
CN09_17085	CN09_08070	CN09_17085	CN09_08070	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.405
CN09_17085	CN09_12120	CN09_17085	CN09_12120	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.405
CN09_17085	CN09_26060	CN09_17085	CN09_26060	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.405
CN09_17085	topA	CN09_17085	CN09_09825	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...]	0.741
CN09_26060	CN09_12120	CN09_26060	CN09_12120	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.572
CN09_26060	CN09_17085	CN09_26060	CN09_17085	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family	0.405
CN09_26060	polA	CN09_26060	CN09_13050	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	0.424
CN09_26060	topA	CN09_26060	CN09_09825	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...]	0.608
polA	CN09_08070	CN09_13050	CN09_08070	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.424

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