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CN09_12230 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_12230" - MarR family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_12230MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (148 aa)    
Predicted Functional Partners:
CN09_12225
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
              0.889
CN09_12220
Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
          0.796
CN09_04580
RNA signal recognition particle 4.5S RNA; Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)
 
          0.757
CN09_03995
Cob(II)yrinic acid a,c-diamide reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
         
  0.655
CN09_27370
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
         
  0.655
CN09_20740
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
         
  0.654
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5’-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) (338 aa)
         
  0.654
CN09_05870
Alpha-ribazole phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
         
  0.654
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (326 aa)
         
  0.653
cobS
Adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5’-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5’-phosphate; Belongs to the CobS family (260 aa)
              0.652
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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