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CN09_12330 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_12330" - Isovaleryl-CoA dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_12330Isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)    
Predicted Functional Partners:
CN09_12325
Methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (535 aa)
   
  0.985
CN09_12305
Enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family (260 aa)
 
 
  0.977
CN09_12310
Hydroxymethylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
 
 
  0.973
CN09_12335
Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method- Protein Homology (1157 aa)
 
     
  0.859
CN09_12315
3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (662 aa)
 
   
  0.857
CN09_27455
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
 
  0.819
CN09_32390
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
 
  0.816
CN09_27335
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (548 aa)
 
   
  0.775
CN09_15370
3-hydroxyisobutyryl-CoA hydrolase; Catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (352 aa)
 
 
  0.767
CN09_12320
Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)
     
      0.756
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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