STRINGSTRING
CN09_12360 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_12360" - Glutathione S-transferase in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_12360Glutathione S-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GST superfamily (206 aa)    
Predicted Functional Partners:
CN09_03045
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
           
  0.778
CN09_12365
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (118 aa)
   
 
  0.581
CN09_30410
Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (366 aa)
              0.507
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (189 aa)
   
 
  0.435
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (520 aa)
   
   
  0.427
rplR
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (120 aa)
     
 
  0.422
CN09_06940
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde (277 aa)
 
   
  0.413
CN09_24640
Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (174 aa)
         
  0.412
CN09_08000
Salicylate hydroxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)
     
 
  0.403
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family (424 aa)
   
 
  0.403
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
Server load: low (9%) [HD]