CN09_12570 protein (Agrobacterium rhizogenes)

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gene neighborhood

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protein homology

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[Homology]

Score

CN09_12570

Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology (89 aa)

Predicted Functional Partners:

CN09_01145

0.864

CN09_29700

0.864

CN09_01150

0.836

CN09_20305

0.831

CN09_04675

0.580

CN09_09285

0.580

CN09_12575

0.408

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_01145	CN09_01150	Derived by automated computational analysis using gene prediction method: GeneMarkS+	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.723
CN09_01145	CN09_12570	Derived by automated computational analysis using gene prediction method: GeneMarkS+	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.864
CN09_01145	CN09_20305	Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.849
CN09_01150	CN09_01145	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.723
CN09_01150	CN09_12570	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.836
CN09_04675	CN09_09285	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.862
CN09_04675	CN09_12570	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.580
CN09_09285	CN09_04675	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.862
CN09_09285	CN09_12570	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.580
CN09_12570	CN09_01145	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.864
CN09_12570	CN09_01150	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.836
CN09_12570	CN09_04675	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.580
CN09_12570	CN09_09285	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.580
CN09_12570	CN09_12575	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module	0.408
CN09_12570	CN09_20305	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.831
CN09_12570	CN09_29700	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.864
CN09_12575	CN09_12570	Antitoxin; Antitoxin component of a toxin-antitoxin (TA) module	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.408
CN09_20305	CN09_01145	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.849
CN09_20305	CN09_12570	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.831
CN09_20305	CN09_29700	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.849