CN09_12585 protein (Agrobacterium rhizogenes)

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Score

CN09_12585

ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family (341 aa)

Predicted Functional Partners:

CN09_12590

0.955

CN09_12595

0.947

CN09_20860

0.856

CN09_23640

0.839

CN09_30845

0.773

CN09_20960

0.768

CN09_30835

0.755

CN09_32915

0.741

CN09_20965

0.739

CN09_22120

0.732

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CN09_12585	CN09_12590	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Putative ribose/galactose/methyl galactoside import ATP-binding protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system	0.955
CN09_12585	CN09_12595	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.947
CN09_12585	CN09_20860	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.856
CN09_12585	CN09_20960	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.768
CN09_12585	CN09_20965	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.739
CN09_12585	CN09_22120	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	D-ribose transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology	0.732
CN09_12585	CN09_23640	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.839
CN09_12585	CN09_30835	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.755
CN09_12585	CN09_30845	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	D-ribose transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology	0.773
CN09_12585	CN09_32915	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	Ribose import ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family	0.741
CN09_12590	CN09_12585	Putative ribose/galactose/methyl galactoside import ATP-binding protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.955
CN09_12590	CN09_12595	Putative ribose/galactose/methyl galactoside import ATP-binding protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.934
CN09_12590	CN09_20860	Putative ribose/galactose/methyl galactoside import ATP-binding protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.738
CN09_12590	CN09_20960	Putative ribose/galactose/methyl galactoside import ATP-binding protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.556
CN09_12590	CN09_30835	Putative ribose/galactose/methyl galactoside import ATP-binding protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.562
CN09_12595	CN09_12585	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family	0.947
CN09_12595	CN09_12590	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Putative ribose/galactose/methyl galactoside import ATP-binding protein; Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and/or methyl galactoside import. Responsible for energy coupling to the transport system	0.934
CN09_12595	CN09_20965	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.593
CN09_12595	CN09_22120	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	D-ribose transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology	0.555
CN09_12595	CN09_23640	Rhizopine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714

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