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CN09_12605 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_12605" - Phosphonate monoester hydrolase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_12605Phosphonate monoester hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (518 aa)    
Predicted Functional Partners:
CN09_12610
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)
              0.865
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
              0.766
CN09_13885
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (128 aa)
 
          0.581
CN09_28785
Sugar transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (504 aa)
 
     
  0.548
CN09_02795
Choline kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
 
          0.499
CN09_12615
Conjugal transfer protein TraA; Derived by automated computational analysis using gene prediction method- Protein Homology (1533 aa)
              0.485
CN09_13610
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (411 aa)
   
          0.434
CN09_21425
Alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (434 aa)
 
     
  0.412
CN09_28775
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
 
     
  0.408
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes (196 aa)
         
  0.406
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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