CN09_12700 protein (Agrobacterium rhizogenes)

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second shell of interactors

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gene fusions

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protein homology

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[Homology]

Score

CN09_12700

Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology (788 aa)

Predicted Functional Partners:

CN09_15290

0.999

CN09_18560

0.999

CN09_12685

0.986

CN09_12710

0.977

CN09_12705

0.976

CN09_12695

0.973

CN09_12715

0.971

CN09_12680

0.957

CN09_12720

0.949

CN09_12675

0.940

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_12675	CN09_12680	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	0.992
CN09_12675	CN09_12685	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology	0.963
CN09_12675	CN09_12695	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	P-type DNA transfer protein VirB5; Derived by automated computational analysis using gene prediction method: Protein Homology	0.909
CN09_12675	CN09_12700	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.940
CN09_12675	CN09_12705	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion protein VirB3; Derived by automated computational analysis using gene prediction method: Protein Homology	0.925
CN09_12675	CN09_12710	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.925
CN09_12675	CN09_12715	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	VirB1 type IV secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.912
CN09_12675	CN09_12720	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.834
CN09_12675	CN09_18560	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.841
CN09_12680	CN09_12675	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	0.992
CN09_12680	CN09_12685	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology	0.993
CN09_12680	CN09_12695	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	P-type DNA transfer protein VirB5; Derived by automated computational analysis using gene prediction method: Protein Homology	0.949
CN09_12680	CN09_12700	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.957
CN09_12680	CN09_12705	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion protein VirB3; Derived by automated computational analysis using gene prediction method: Protein Homology	0.981
CN09_12680	CN09_12710	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.971
CN09_12680	CN09_12715	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	VirB1 type IV secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.948
CN09_12680	CN09_12720	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.852
CN09_12680	CN09_18560	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.520
CN09_12685	CN09_12675	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	0.963
CN09_12685	CN09_12680	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TraJ; Derived by automated computational analysis using gene prediction method: Protein Homology	0.993