CN09_12875 protein (Agrobacterium rhizogenes)

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experimentally determined

Predicted Interactions

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gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_12875

Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology (103 aa)

Predicted Functional Partners:

CN09_33735

0.803

CN09_19590

0.802

CN09_33665

0.794

CN09_33685

0.789

CN09_19535

0.788

CN09_33700

0.787

CN09_19550

0.786

TrbG

0.783

CN09_33690

0.782

CN09_33655

0.776

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_12875	CN09_19535	CN09_12875	CN09_19535	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	0.788
CN09_12875	CN09_19550	CN09_12875	CN09_19550	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology	0.786
CN09_12875	CN09_19590	CN09_12875	CN09_19590	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology	0.802
CN09_12875	CN09_33655	CN09_12875	CN09_33655	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology	0.776
CN09_12875	CN09_33665	CN09_12875	CN09_33665	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbE; Derived by automated computational analysis using gene prediction method: Protein Homology	0.794
CN09_12875	CN09_33685	CN09_12875	CN09_33685	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Type iv secretion system protein trbf; Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	0.789
CN09_12875	CN09_33690	CN09_12875	CN09_33690	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology	0.782
CN09_12875	CN09_33700	CN09_12875	CN09_33700	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology	0.787
CN09_12875	CN09_33735	CN09_12875	CN09_33735	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology	0.803
CN09_12875	TrbG	CN09_12875	CN09_19540	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	P-type conjugative transfer protein trbg; Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology	0.783
CN09_19535	CN09_12875	CN09_19535	CN09_12875	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.788
CN09_19535	CN09_19550	CN09_19535	CN09_19550	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology	0.962
CN09_19535	CN09_19590	CN09_19535	CN09_19590	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology	0.828
CN09_19535	CN09_33655	CN09_19535	CN09_33655	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology	0.830
CN09_19535	CN09_33665	CN09_19535	CN09_33665	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbE; Derived by automated computational analysis using gene prediction method: Protein Homology	0.834
CN09_19535	CN09_33690	CN09_19535	CN09_33690	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology	0.838
CN09_19535	CN09_33700	CN09_19535	CN09_33700	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology	0.839
CN09_19535	CN09_33735	CN09_19535	CN09_33735	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology	0.844
CN09_19535	TrbG	CN09_19535	CN09_19540	Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology	P-type conjugative transfer protein trbg; Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method: Protein Homology	0.965
CN09_19550	CN09_12875	CN09_19550	CN09_12875	Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method: Protein Homology	Hypothetical protein; Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.786

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