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CN09_12960 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_12960" - Membrane protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_12960Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)    
Predicted Functional Partners:
CN09_23625
Precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (408 aa)
 
          0.999
CN09_12965
Cobalt transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (69 aa)
 
          0.988
CN09_12955
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)
 
          0.948
CN09_12970
Histidine phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (188 aa)
 
          0.847
cobH
Catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
 
          0.730
CN09_23620
Cobalt-precorrin-6X reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
 
          0.727
CN09_23615
Catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
          0.720
CN09_05820
Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method- Protein Homology (1255 aa)
 
          0.708
CN09_23630
Precorrin-4 C11-methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the precorrin methyltransferase family (252 aa)
 
          0.705
cobB
Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family (435 aa)
 
          0.698
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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