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CN09_13000 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_13000" - Arabinose ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_13000Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (445 aa)    
Predicted Functional Partners:
CN09_12980
Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (133 aa)
 
     
  0.824
CN09_12975
SURF1-like protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
          0.820
CN09_12995
Ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
 
        0.785
CN09_12985
Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
 
          0.776
CN09_01970
Ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)
 
        0.713
CN09_12990
Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family (667 aa)
 
        0.674
CN09_16890
SURF1-like protein; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
 
          0.573
CN09_13005
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
         
  0.477
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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