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CN09_13035 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_13035" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_13035Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (461 aa)    
Predicted Functional Partners:
CN09_13030
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
              0.645
CN09_13025
Adenine deaminase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family (594 aa)
              0.634
CN09_13040
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (778 aa)
              0.585
CN09_27465
Sodium-dicarboxylate symporter; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)
 
 
 
  0.458
CN09_14320
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
            0.435
CN09_13785
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (327 aa)
 
          0.413
CN09_04100
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (690 aa)
 
          0.408
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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