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CN09_13530 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_13530" - Threonine transporter in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_13530Threonine transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)    
Predicted Functional Partners:
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily (165 aa)
              0.744
CN09_14215
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
   
          0.737
CN09_25570
Aspartate/tyrosine/aromatic aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)
              0.725
CN09_12090
Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
   
          0.722
pdxH
Pyridoxine/pyridoxamine 5’-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5’- phosphate (PNP) or pyridoxamine 5’-phosphate (PMP) into pyridoxal 5’-phosphate (PLP) (206 aa)
              0.718
CN09_02015
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
   
          0.703
CN09_04515
ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method- Protein Homology (626 aa)
              0.628
CN09_07250
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (630 aa)
              0.529
CN09_13525
Type II secretion system protein; Derived by automated computational analysis using gene prediction method- Protein Homology (325 aa)
              0.528
CN09_10850
Permease; Derived by automated computational analysis using gene prediction method- Protein Homology (303 aa)
              0.524
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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