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CN09_13695 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_13695" - Beta-N-acetylhexosaminidase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_13695Beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method- Protein Homology (639 aa)    
Predicted Functional Partners:
CN09_13685
RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (287 aa)
 
          0.999
CN09_26870
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
   
   
  0.980
CN09_13690
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
 
 
  0.909
cutC
Copper homeostasis protein CutC; Participates in the control of copper homeostasis (236 aa)
 
          0.902
CN09_32710
Microcystinase C; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) (480 aa)
 
          0.831
CN09_13675
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (161 aa)
 
          0.820
CN09_13670
Microcystinase C; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) (491 aa)
 
          0.803
CN09_29325
N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. NagA family (385 aa)
 
     
  0.801
CN09_13680
Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
 
          0.792
CN09_17085
Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family (888 aa)
         
  0.787
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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