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CN09_13745 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_13745" - Aldehyde-activating protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_13745Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method- Protein Homology (151 aa)    
Predicted Functional Partners:
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
         
  0.943
CN09_06280
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
   
          0.645
CN09_28770
Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology (124 aa)
              0.610
CN09_13740
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
              0.586
CN09_05655
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
 
          0.513
CN09_13735
SelT/selW/selH selenoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (97 aa)
              0.413
CN09_12600
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (168 aa)
 
          0.404
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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