Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_17085 | gltB | CN09_17085 | CN09_01825 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
| CN09_17085 | guaA | CN09_17085 | CN09_14055 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Gmp synthase; Catalyzes the synthesis of GMP from XMP | 0.999 |
| CN09_17085 | ispDF | CN09_17085 | CN09_07765 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) | 0.997 |
| CN09_17085 | lepA | CN09_17085 | CN09_13750 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Gtp-binding protein lepa; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner | 0.999 |
| CN09_17085 | pheT | CN09_17085 | CN09_13825 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily | 0.999 |
| CN09_17085 | rplB | CN09_17085 | CN09_08880 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome | 0.999 |
| CN09_17085 | rplT | CN09_17085 | CN09_13810 | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit | 0.999 |
| gltB | CN09_17085 | CN09_01825 | CN09_17085 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.999 |
| gltB | guaA | CN09_01825 | CN09_14055 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | Gmp synthase; Catalyzes the synthesis of GMP from XMP | 0.999 |
| gltB | lepA | CN09_01825 | CN09_13750 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | Gtp-binding protein lepa; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner | 0.999 |
| gltB | pheT | CN09_01825 | CN09_13825 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily | 0.999 |
| gltB | polA | CN09_01825 | CN09_13050 | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.999 |
| guaA | CN09_17085 | CN09_14055 | CN09_17085 | Gmp synthase; Catalyzes the synthesis of GMP from XMP | Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family | 0.999 |
| guaA | gltB | CN09_14055 | CN09_01825 | Gmp synthase; Catalyzes the synthesis of GMP from XMP | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.999 |
| guaA | ispDF | CN09_14055 | CN09_07765 | Gmp synthase; Catalyzes the synthesis of GMP from XMP | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) | 0.768 |
| guaA | lepA | CN09_14055 | CN09_13750 | Gmp synthase; Catalyzes the synthesis of GMP from XMP | Gtp-binding protein lepa; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner | 0.999 |
| guaA | pheT | CN09_14055 | CN09_13825 | Gmp synthase; Catalyzes the synthesis of GMP from XMP | Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily | 0.999 |
| guaA | polA | CN09_14055 | CN09_13050 | Gmp synthase; Catalyzes the synthesis of GMP from XMP | In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.999 |
| guaA | rplB | CN09_14055 | CN09_08880 | Gmp synthase; Catalyzes the synthesis of GMP from XMP | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome | 0.999 |
| guaA | rplQ | CN09_14055 | CN09_08770 | Gmp synthase; Catalyzes the synthesis of GMP from XMP | 50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.858 |
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