CN09_13840 protein (Agrobacterium rhizogenes)

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experimentally determined

Predicted Interactions

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protein homology

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Score

CN09_13840

Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1838 aa)

Predicted Functional Partners:

CN09_13835

0.994

CN09_25725

0.990

CN09_15290

0.948

CN09_25730

0.913

CN09_06175

0.838

CN09_01825

0.833

CN09_25735

0.827

macB

0.741

CN09_31135

0.704

CN09_27740

0.661

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_01825	CN09_06175	CN09_01825	CN09_06175	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.918
CN09_01825	CN09_13840	CN09_01825	CN09_13840	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.833
CN09_01825	CN09_15290	CN09_01825	CN09_15290	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.837
CN09_06175	CN09_01825	CN09_06175	CN09_01825	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.918
CN09_06175	CN09_13840	CN09_06175	CN09_13840	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.838
CN09_06175	CN09_15290	CN09_06175	CN09_15290	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_06175	CN09_27740	CN09_06175	CN09_27740	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.631
CN09_13835	CN09_13840	CN09_13835	CN09_13840	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.994
CN09_13835	CN09_15290	CN09_13835	CN09_15290	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.441
CN09_13835	CN09_25725	CN09_13835	CN09_25725	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.806
CN09_13835	CN09_25730	CN09_13835	CN09_25730	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.700
CN09_13835	CN09_25735	CN09_13835	CN09_25735	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.418
CN09_13840	CN09_01825	CN09_13840	CN09_01825	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.833
CN09_13840	CN09_06175	CN09_13840	CN09_06175	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.838
CN09_13840	CN09_13835	CN09_13840	CN09_13835	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.994
CN09_13840	CN09_15290	CN09_13840	CN09_15290	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.948
CN09_13840	CN09_25725	CN09_13840	CN09_25725	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.990
CN09_13840	CN09_25730	CN09_13840	CN09_25730	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.913
CN09_13840	CN09_25735	CN09_13840	CN09_25735	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.827
CN09_13840	CN09_27740	CN09_13840	CN09_27740	Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.661

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