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CN09_14160 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_14160" - SAM-dependent methlyltransferase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_14160SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)    
Predicted Functional Partners:
CN09_14155
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method- Protein Homology (195 aa)
            0.873
pyrF
Orotidine 5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily (230 aa)
              0.709
CN09_14145
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (95 aa)
              0.607
CN09_27330
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (423 aa)
   
          0.581
CN09_14165
Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] (372 aa)
              0.556
CN09_02070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (67 aa)
   
          0.516
CN09_10885
CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family (286 aa)
 
     
  0.433
CN09_17455
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (317 aa)
   
          0.430
CN09_10415
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)
 
          0.429
CN09_16625
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (188 aa)
   
          0.426
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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