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CN09_14180 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_14180" - Endonuclease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_14180Endonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)    
Predicted Functional Partners:
CN09_24745
Glycerol-3-phosphate transporter permease; With UgpEC is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
         
  0.746
CN09_24750
Glycerol-3-phosphate ABC transporter substrate-binding protein; With UgpACE is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)
              0.744
CN09_15390
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (852 aa)
              0.729
CN09_08255
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (848 aa)
              0.729
CN09_11985
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (171 aa)
 
          0.721
CN09_04630
Repressor; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
   
          0.707
CN09_06965
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (140 aa)
 
          0.696
CN09_08645
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (339 aa)
 
          0.680
CN09_03935
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (348 aa)
   
          0.674
CN09_22470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (2631 aa)
 
          0.672
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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