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CN09_14345 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_14345" - Transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_14345Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)    
Predicted Functional Partners:
CN09_14350
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (427 aa)
 
 
  0.795
CN09_14355
Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology (133 aa)
              0.602
CN09_05690
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
   
     
  0.508
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
         
  0.472
CN09_01520
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
   
  0.467
CN09_21550
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
   
          0.467
CN09_30755
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
 
   
  0.459
CN09_32330
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)
   
     
  0.453
CN09_02740
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (303 aa)
 
   
  0.432
CN09_19705
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
   
          0.417
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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