miaB protein (Agrobacterium rhizogenes) - STRING interaction network

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miaB

tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (470 aa)

Predicted Functional Partners:

ybeY

0.960

CN09_14660

0.942

CN09_17085

0.924

ribB

0.917

CN09_14670

0.914

CN09_14650

0.900

CN09_10375

0.882

CN09_14635

0.869

CN09_14630

0.866

CN09_14640

0.861

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_10375	CN09_14635	CN09_10375	CN09_14635	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	O-sialoglycoprotein endopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_10375	CN09_14660	CN09_10375	CN09_14660	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method- Protein Homology	0.910
CN09_10375	CN09_14670	CN09_10375	CN09_14670	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Hemolysin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.565
CN09_10375	CN09_17085	CN09_10375	CN09_17085	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family	0.999
CN09_10375	miaB	CN09_10375	CN09_14655	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	0.882
CN09_10375	ribB	CN09_10375	CN09_16765	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.999
CN09_10375	ybeY	CN09_10375	CN09_14665	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA	0.999
CN09_14630	CN09_14635	CN09_14630	CN09_14635	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	O-sialoglycoprotein endopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_14630	CN09_14640	CN09_14630	CN09_14640	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.931
CN09_14630	CN09_14650	CN09_14630	CN09_14650	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.884
CN09_14630	CN09_14660	CN09_14630	CN09_14660	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphate starvation protein PhoH; Derived by automated computational analysis using gene prediction method- Protein Homology	0.834
CN09_14630	CN09_14670	CN09_14630	CN09_14670	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Hemolysin; Derived by automated computational analysis using gene prediction method- Protein Homology	0.827
CN09_14630	CN09_17085	CN09_14630	CN09_17085	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Pyruvate, phosphate dikinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the PEP-utilizing enzyme family	0.507
CN09_14630	miaB	CN09_14630	CN09_14655	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine	0.866
CN09_14630	ribB	CN09_14630	CN09_16765	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family	0.739
CN09_14630	ybeY	CN09_14630	CN09_14665	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA	0.834
CN09_14635	CN09_10375	CN09_14635	CN09_10375	O-sialoglycoprotein endopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family	0.999
CN09_14635	CN09_14630	CN09_14635	CN09_14630	O-sialoglycoprotein endopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Iron transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.999
CN09_14635	CN09_14640	CN09_14635	CN09_14640	O-sialoglycoprotein endopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.963
CN09_14635	CN09_14650	CN09_14635	CN09_14650	O-sialoglycoprotein endopeptidase; Derived by automated computational analysis using gene prediction method- Protein Homology	Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.902

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