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CN09_14720 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_14720" - Ribokinase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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CN09_14720Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway (299 aa)    
Predicted Functional Partners:
CN09_14710
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
     
  0.824
CN09_13030
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
 
     
  0.810
CN09_05855
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (316 aa)
     
  0.798
CN09_18400
Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
     
  0.796
CN09_24315
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (348 aa)
 
     
  0.772
CN09_13440
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate (257 aa)
         
  0.750
CN09_20115
Ribose ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the RbsD / FucU family (151 aa)
              0.744
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (913 aa)
              0.729
CN09_22125
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (340 aa)
 
     
  0.711
CN09_24330
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (320 aa)
         
  0.696
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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