Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CN09_14725 | CN09_14730 | CN09_14725 | CN09_14730 | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | 0.880 |
| CN09_14725 | CN09_14735 | CN09_14725 | CN09_14735 | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.442 |
| CN09_14725 | fmt | CN09_14725 | CN09_14745 | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Methionyl-trna formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | 0.813 |
| CN09_14725 | truA | CN09_14725 | CN09_14750 | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs | 0.813 |
| CN09_14730 | CN09_14725 | CN09_14730 | CN09_14725 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.880 |
| CN09_14730 | CN09_14735 | CN09_14730 | CN09_14735 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.660 |
| CN09_14730 | CN09_14740 | CN09_14730 | CN09_14740 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.528 |
| CN09_14730 | fmt | CN09_14730 | CN09_14745 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | Methionyl-trna formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | 0.999 |
| CN09_14730 | truA | CN09_14730 | CN09_14750 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | Pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs | 0.999 |
| CN09_14735 | CN09_14725 | CN09_14735 | CN09_14725 | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.442 |
| CN09_14735 | CN09_14730 | CN09_14735 | CN09_14730 | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | 0.660 |
| CN09_14735 | CN09_14740 | CN09_14735 | CN09_14740 | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.645 |
| CN09_14735 | fmt | CN09_14735 | CN09_14745 | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Methionyl-trna formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | 0.566 |
| CN09_14735 | truA | CN09_14735 | CN09_14750 | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology | Pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs | 0.555 |
| CN09_14740 | CN09_14730 | CN09_14740 | CN09_14730 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | 0.528 |
| CN09_14740 | CN09_14735 | CN09_14740 | CN09_14735 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.645 |
| CN09_14740 | fmt | CN09_14740 | CN09_14745 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Methionyl-trna formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | 0.654 |
| CN09_14740 | truA | CN09_14740 | CN09_14750 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Pseudouridine synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs | 0.666 |
| fmt | CN09_14725 | CN09_14745 | CN09_14725 | Methionyl-trna formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.813 |
| fmt | CN09_14730 | CN09_14745 | CN09_14730 | Methionyl-trna formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | 0.999 |
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