CN09_14735 protein (Agrobacterium rhizogenes)

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Score

CN09_14735

Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology (86 aa)

Predicted Functional Partners:

CN09_14730

0.655

CN09_14740

0.645

fmt

0.568

truA

0.555

CN09_14725

0.442

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CN09_14725	CN09_14730	CN09_14725	CN09_14730	DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	0.870
CN09_14725	CN09_14735	CN09_14725	CN09_14735	DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.442
CN09_14725	fmt	CN09_14725	CN09_14745	DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	0.801
CN09_14725	truA	CN09_14725	CN09_14750	DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	0.801
CN09_14730	CN09_14725	CN09_14730	CN09_14725	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.870
CN09_14730	CN09_14735	CN09_14730	CN09_14735	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.655
CN09_14730	CN09_14740	CN09_14730	CN09_14740	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.522
CN09_14730	fmt	CN09_14730	CN09_14745	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	0.999
CN09_14730	truA	CN09_14730	CN09_14750	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	0.999
CN09_14735	CN09_14725	CN09_14735	CN09_14725	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.442
CN09_14735	CN09_14730	CN09_14735	CN09_14730	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	0.655
CN09_14735	CN09_14740	CN09_14735	CN09_14740	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.645
CN09_14735	fmt	CN09_14735	CN09_14745	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	0.568
CN09_14735	truA	CN09_14735	CN09_14750	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	0.555
CN09_14740	CN09_14730	CN09_14740	CN09_14730	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	0.522
CN09_14740	CN09_14735	CN09_14740	CN09_14735	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.645
CN09_14740	fmt	CN09_14740	CN09_14745	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	0.648
CN09_14740	truA	CN09_14740	CN09_14750	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	0.662
fmt	CN09_14725	CN09_14745	CN09_14725	Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.801
fmt	CN09_14730	CN09_14745	CN09_14730	Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions	0.999

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