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CN09_14855 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_14855" - Histidine kinase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_14855Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (506 aa)    
Predicted Functional Partners:
ispDF
Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) (406 aa)
              0.983
CN09_28440
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
     
  0.888
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
         
  0.876
pleD
Response regulator PleD; Involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; Derived by automated computational analysis using gene prediction method- Protein Homology (457 aa)
 
     
  0.868
CN09_31110
DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
         
  0.789
CN09_07025
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (144 aa)
   
          0.661
CN09_20015
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (147 aa)
   
          0.656
CN09_28225
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (247 aa)
   
          0.646
CN09_15095
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (408 aa)
 
     
  0.624
CN09_17420
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (435 aa)
 
     
  0.620
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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