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CN09_14930 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_14930" - Short-chain dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_14930Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family (282 aa)    
Predicted Functional Partners:
CN09_14935
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
     
 
  0.738
CN09_30360
3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
 
 
  0.624
CN09_14925
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (309 aa)
              0.624
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
 
  0.527
CN09_02095
Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
 
  0.519
CN09_30355
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
 
     
  0.514
CN09_28755
Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
 
     
  0.451
CN09_18535
Hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (247 aa)
 
     
  0.447
CN09_19740
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
 
     
  0.433
CN09_32520
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)
 
 
  0.403
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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