CN09_15050 protein (Agrobacterium rhizogenes)

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second shell of interactors

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gene neighborhood

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co-expression

protein homology

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Score

CN09_15050

ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)

Predicted Functional Partners:

CN09_15035

0.996

CN09_15045

0.996

CN09_15040

0.996

CN09_00080

0.905

CN09_00075

0.901

CN09_00070

0.842

CN09_00130

0.814

CN09_00135

0.789

CN09_03380

0.761

CN09_00125

0.719

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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node1	node2	node1 annotation	node2 annotation	score
CN09_00070	CN09_00075	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.974
CN09_00070	CN09_00080	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.975
CN09_00070	CN09_00130	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.897
CN09_00070	CN09_00135	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.889
CN09_00070	CN09_03380	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.760
CN09_00070	CN09_15035	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.892
CN09_00070	CN09_15045	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.877
CN09_00070	CN09_15050	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.842
CN09_00075	CN09_00070	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.974
CN09_00075	CN09_00080	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.874
CN09_00075	CN09_00125	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.878
CN09_00075	CN09_00130	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.502
CN09_00075	CN09_15035	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.432
CN09_00075	CN09_15040	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.869
CN09_00075	CN09_15050	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.901
CN09_00080	CN09_00070	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.975
CN09_00080	CN09_00075	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.874
CN09_00080	CN09_00125	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.878
CN09_00080	CN09_00130	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	0.425
CN09_00080	CN09_15035	ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.413